aboutsummaryrefslogtreecommitdiffstats
path: root/swarm/storage/ldbstore.go
blob: fd5ec9e30a9f66def625a358f7e1efe01d13ee4f (plain) (blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
1001
1002
1003
1004
1005
1006
1007
1008
1009
1010
1011
1012
1013
1014
1015
1016
1017
1018
1019
1020
1021
1022
1023
1024
1025
1026
1027
1028
1029
1030
1031
1032
1033
1034
1035
1036
1037
1038
1039
1040
1041
1042
1043
1044
1045
1046
1047
1048
1049
1050
1051
1052
1053
1054
1055
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
1067
1068
1069
1070
1071
1072
1073
1074
1075
1076
1077
1078
1079
1080
1081
1082
// Copyright 2016 The go-ethereum Authors
// This file is part of the go-ethereum library.
//
// The go-ethereum library is free software: you can redistribute it and/or modify
// it under the terms of the GNU Lesser General Public License as published by
// the Free Software Foundation, either version 3 of the License, or
// (at your option) any later version.
//
// The go-ethereum library is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
// GNU Lesser General Public License for more details.
//
// You should have received a copy of the GNU Lesser General Public License
// along with the go-ethereum library. If not, see <http://www.gnu.org/licenses/>.

// disk storage layer for the package bzz
// DbStore implements the ChunkStore interface and is used by the FileStore as
// persistent storage of chunks
// it implements purging based on access count allowing for external control of
// max capacity

package storage

import (
    "archive/tar"
    "bytes"
    "context"
    "encoding/binary"
    "encoding/hex"
    "errors"
    "fmt"
    "io"
    "io/ioutil"
    "sync"

    "github.com/ethereum/go-ethereum/metrics"
    "github.com/ethereum/go-ethereum/rlp"
    "github.com/ethereum/go-ethereum/swarm/log"
    "github.com/ethereum/go-ethereum/swarm/storage/mock"
    "github.com/syndtr/goleveldb/leveldb"
)

const (
    defaultGCRatio    = 10
    defaultMaxGCRound = 10000
    defaultMaxGCBatch = 5000

    wEntryCnt  = 1 << 0
    wIndexCnt  = 1 << 1
    wAccessCnt = 1 << 2
)

var (
    dbEntryCount = metrics.NewRegisteredCounter("ldbstore.entryCnt", nil)
)

var (
    keyIndex       = byte(0)
    keyAccessCnt   = []byte{2}
    keyEntryCnt    = []byte{3}
    keyDataIdx     = []byte{4}
    keyData        = byte(6)
    keyDistanceCnt = byte(7)
    keySchema      = []byte{8}
    keyGCIdx       = byte(9) // access to chunk data index, used by garbage collection in ascending order from first entry
)

var (
    ErrDBClosed = errors.New("LDBStore closed")
)

type LDBStoreParams struct {
    *StoreParams
    Path string
    Po   func(Address) uint8
}

// NewLDBStoreParams constructs LDBStoreParams with the specified values.
func NewLDBStoreParams(storeparams *StoreParams, path string) *LDBStoreParams {
    return &LDBStoreParams{
        StoreParams: storeparams,
        Path:        path,
        Po:          func(k Address) (ret uint8) { return uint8(Proximity(storeparams.BaseKey, k[:])) },
    }
}

type garbage struct {
    maxRound int           // maximum number of chunks to delete in one garbage collection round
    maxBatch int           // maximum number of chunks to delete in one db request batch
    ratio    int           // 1/x ratio to calculate the number of chunks to gc on a low capacity db
    count    int           // number of chunks deleted in running round
    target   int           // number of chunks to delete in running round
    batch    *dbBatch      // the delete batch
    runC     chan struct{} // struct in chan means gc is NOT running
}

type LDBStore struct {
    db *LDBDatabase

    // this should be stored in db, accessed transactionally
    entryCnt  uint64 // number of items in the LevelDB
    accessCnt uint64 // ever-accumulating number increased every time we read/access an entry
    dataIdx   uint64 // similar to entryCnt, but we only increment it
    capacity  uint64
    bucketCnt []uint64

    hashfunc SwarmHasher
    po       func(Address) uint8

    batchesC chan struct{}
    closed   bool
    batch    *dbBatch
    lock     sync.RWMutex
    quit     chan struct{}
    gc       *garbage

    // Functions encodeDataFunc is used to bypass
    // the default functionality of DbStore with
    // mock.NodeStore for testing purposes.
    encodeDataFunc func(chunk Chunk) []byte
    // If getDataFunc is defined, it will be used for
    // retrieving the chunk data instead from the local
    // LevelDB database.
    getDataFunc func(key Address) (data []byte, err error)
}

type dbBatch struct {
    *leveldb.Batch
    err error
    c   chan struct{}
}

func newBatch() *dbBatch {
    return &dbBatch{Batch: new(leveldb.Batch), c: make(chan struct{})}
}

// TODO: Instead of passing the distance function, just pass the address from which distances are calculated
// to avoid the appearance of a pluggable distance metric and opportunities of bugs associated with providing
// a function different from the one that is actually used.
func NewLDBStore(params *LDBStoreParams) (s *LDBStore, err error) {
    s = new(LDBStore)
    s.hashfunc = params.Hash
    s.quit = make(chan struct{})

    s.batchesC = make(chan struct{}, 1)
    go s.writeBatches()
    s.batch = newBatch()
    // associate encodeData with default functionality
    s.encodeDataFunc = encodeData

    s.db, err = NewLDBDatabase(params.Path)
    if err != nil {
        return nil, err
    }

    s.po = params.Po
    s.setCapacity(params.DbCapacity)

    s.bucketCnt = make([]uint64, 0x100)
    for i := 0; i < 0x100; i++ {
        k := make([]byte, 2)
        k[0] = keyDistanceCnt
        k[1] = uint8(i)
        cnt, _ := s.db.Get(k)
        s.bucketCnt[i] = BytesToU64(cnt)
    }
    data, _ := s.db.Get(keyEntryCnt)
    s.entryCnt = BytesToU64(data)
    data, _ = s.db.Get(keyAccessCnt)
    s.accessCnt = BytesToU64(data)
    data, _ = s.db.Get(keyDataIdx)
    s.dataIdx = BytesToU64(data)

    // set up garbage collection
    s.gc = &garbage{
        maxBatch: defaultMaxGCBatch,
        maxRound: defaultMaxGCRound,
        ratio:    defaultGCRatio,
    }

    s.gc.runC = make(chan struct{}, 1)
    s.gc.runC <- struct{}{}

    return s, nil
}

// MarkAccessed increments the access counter as a best effort for a chunk, so
// the chunk won't get garbage collected.
func (s *LDBStore) MarkAccessed(addr Address) {
    s.lock.Lock()
    defer s.lock.Unlock()

    if s.closed {
        return
    }

    proximity := s.po(addr)
    s.tryAccessIdx(addr, proximity)
}

// initialize and set values for processing of gc round
func (s *LDBStore) startGC(c int) {

    s.gc.count = 0
    // calculate the target number of deletions
    if c >= s.gc.maxRound {
        s.gc.target = s.gc.maxRound
    } else {
        s.gc.target = c / s.gc.ratio
    }
    s.gc.batch = newBatch()
    log.Debug("startgc", "requested", c, "target", s.gc.target)
}

// NewMockDbStore creates a new instance of DbStore with
// mockStore set to a provided value. If mockStore argument is nil,
// this function behaves exactly as NewDbStore.
func NewMockDbStore(params *LDBStoreParams, mockStore *mock.NodeStore) (s *LDBStore, err error) {
    s, err = NewLDBStore(params)
    if err != nil {
        return nil, err
    }

    // replace put and get with mock store functionality
    if mockStore != nil {
        s.encodeDataFunc = newMockEncodeDataFunc(mockStore)
        s.getDataFunc = newMockGetDataFunc(mockStore)
    }
    return
}

type dpaDBIndex struct {
    Idx    uint64
    Access uint64
}

func BytesToU64(data []byte) uint64 {
    if len(data) < 8 {
        return 0
    }
    return binary.BigEndian.Uint64(data)
}

func U64ToBytes(val uint64) []byte {
    data := make([]byte, 8)
    binary.BigEndian.PutUint64(data, val)
    return data
}

func getIndexKey(hash Address) []byte {
    hashSize := len(hash)
    key := make([]byte, hashSize+1)
    key[0] = keyIndex
    copy(key[1:], hash[:])
    return key
}

func getDataKey(idx uint64, po uint8) []byte {
    key := make([]byte, 10)
    key[0] = keyData
    key[1] = po
    binary.BigEndian.PutUint64(key[2:], idx)

    return key
}

func getGCIdxKey(index *dpaDBIndex) []byte {
    key := make([]byte, 9)
    key[0] = keyGCIdx
    binary.BigEndian.PutUint64(key[1:], index.Access)
    return key
}

func getGCIdxValue(index *dpaDBIndex, po uint8, addr Address) []byte {
    val := make([]byte, 41) // po = 1, index.Index = 8, Address = 32
    val[0] = po
    binary.BigEndian.PutUint64(val[1:], index.Idx)
    copy(val[9:], addr)
    return val
}

func parseIdxKey(key []byte) (byte, []byte) {
    return key[0], key[1:]
}

func parseGCIdxEntry(accessCnt []byte, val []byte) (index *dpaDBIndex, po uint8, addr Address) {
    index = &dpaDBIndex{
        Idx:    binary.BigEndian.Uint64(val[1:]),
        Access: binary.BigEndian.Uint64(accessCnt),
    }
    po = val[0]
    addr = val[9:]
    return
}

func encodeIndex(index *dpaDBIndex) []byte {
    data, _ := rlp.EncodeToBytes(index)
    return data
}

func encodeData(chunk Chunk) []byte {
    // Always create a new underlying array for the returned byte slice.
    // The chunk.Address array may be used in the returned slice which
    // may be changed later in the code or by the LevelDB, resulting
    // that the Address is changed as well.
    return append(append([]byte{}, chunk.Address()[:]...), chunk.Data()...)
}

func decodeIndex(data []byte, index *dpaDBIndex) error {
    dec := rlp.NewStream(bytes.NewReader(data), 0)
    return dec.Decode(index)
}

func decodeData(addr Address, data []byte) (Chunk, error) {
    return NewChunk(addr, data[32:]), nil
}

func (s *LDBStore) collectGarbage() error {
    // prevent duplicate gc from starting when one is already running
    select {
    case <-s.gc.runC:
    default:
        return nil
    }

    s.lock.Lock()
    entryCnt := s.entryCnt
    s.lock.Unlock()

    metrics.GetOrRegisterCounter("ldbstore.collectgarbage", nil).Inc(1)

    // calculate the amount of chunks to collect and reset counter
    s.startGC(int(entryCnt))
    log.Debug("collectGarbage", "target", s.gc.target, "entryCnt", entryCnt)

    for s.gc.count < s.gc.target {
        it := s.db.NewIterator()
        ok := it.Seek([]byte{keyGCIdx})
        var singleIterationCount int

        // every batch needs a lock so we avoid entries changing accessidx in the meantime
        s.lock.Lock()
        for ; ok && (singleIterationCount < s.gc.maxBatch); ok = it.Next() {

            // quit if no more access index keys
            itkey := it.Key()
            if (itkey == nil) || (itkey[0] != keyGCIdx) {
                break
            }

            // get chunk data entry from access index
            val := it.Value()
            index, po, hash := parseGCIdxEntry(itkey[1:], val)
            keyIdx := make([]byte, 33)
            keyIdx[0] = keyIndex
            copy(keyIdx[1:], hash)

            // add delete operation to batch
            s.delete(s.gc.batch.Batch, index, keyIdx, po)
            singleIterationCount++
            s.gc.count++
            log.Trace("garbage collect enqueued chunk for deletion", "key", hash)

            // break if target is not on max garbage batch boundary
            if s.gc.count >= s.gc.target {
                break
            }
        }

        s.writeBatch(s.gc.batch, wEntryCnt)
        log.Trace("garbage collect batch done", "batch", singleIterationCount, "total", s.gc.count)
        s.lock.Unlock()
        it.Release()
    }

    metrics.GetOrRegisterCounter("ldbstore.collectgarbage.delete", nil).Inc(int64(s.gc.count))
    log.Debug("garbage collect done", "c", s.gc.count)
    s.gc.runC <- struct{}{}

    return nil
}

// Export writes all chunks from the store to a tar archive, returning the
// number of chunks written.
func (s *LDBStore) Export(out io.Writer) (int64, error) {
    tw := tar.NewWriter(out)
    defer tw.Close()

    it := s.db.NewIterator()
    defer it.Release()
    var count int64
    for ok := it.Seek([]byte{keyIndex}); ok; ok = it.Next() {
        key := it.Key()
        if (key == nil) || (key[0] != keyIndex) {
            break
        }

        var index dpaDBIndex

        hash := key[1:]
        decodeIndex(it.Value(), &index)
        po := s.po(hash)
        datakey := getDataKey(index.Idx, po)
        log.Trace("store.export", "dkey", fmt.Sprintf("%x", datakey), "dataidx", index.Idx, "po", po)
        data, err := s.db.Get(datakey)
        if err != nil {
            log.Warn(fmt.Sprintf("Chunk %x found but could not be accessed: %v", key, err))
            continue
        }

        hdr := &tar.Header{
            Name: hex.EncodeToString(hash),
            Mode: 0644,
            Size: int64(len(data)),
        }
        if err := tw.WriteHeader(hdr); err != nil {
            return count, err
        }
        if _, err := tw.Write(data); err != nil {
            return count, err
        }
        count++
    }

    return count, nil
}

// of chunks read.
func (s *LDBStore) Import(in io.Reader) (int64, error) {
    tr := tar.NewReader(in)

    ctx, cancel := context.WithCancel(context.Background())
    defer cancel()

    countC := make(chan int64)
    errC := make(chan error)
    var count int64
    go func() {
        for {
            hdr, err := tr.Next()
            if err == io.EOF {
                break
            } else if err != nil {
                select {
                case errC <- err:
                case <-ctx.Done():
                }
            }

            if len(hdr.Name) != 64 {
                log.Warn("ignoring non-chunk file", "name", hdr.Name)
                continue
            }

            keybytes, err := hex.DecodeString(hdr.Name)
            if err != nil {
                log.Warn("ignoring invalid chunk file", "name", hdr.Name, "err", err)
                continue
            }

            data, err := ioutil.ReadAll(tr)
            if err != nil {
                select {
                case errC <- err:
                case <-ctx.Done():
                }
            }
            key := Address(keybytes)
            chunk := NewChunk(key, data[32:])

            go func() {
                select {
                case errC <- s.Put(ctx, chunk):
                case <-ctx.Done():
                }
            }()

            count++
        }
        countC <- count
    }()

    // wait for all chunks to be stored
    i := int64(0)
    var total int64
    for {
        select {
        case err := <-errC:
            if err != nil {
                return count, err
            }
            i++
        case total = <-countC:
        case <-ctx.Done():
            return i, ctx.Err()
        }
        if total > 0 && i == total {
            return total, nil
        }
    }
}

// Cleanup iterates over the database and deletes chunks if they pass the `f` condition
func (s *LDBStore) Cleanup(f func(Chunk) bool) {
    var errorsFound, removed, total int

    it := s.db.NewIterator()
    defer it.Release()
    for ok := it.Seek([]byte{keyIndex}); ok; ok = it.Next() {
        key := it.Key()
        if (key == nil) || (key[0] != keyIndex) {
            break
        }
        total++
        var index dpaDBIndex
        err := decodeIndex(it.Value(), &index)
        if err != nil {
            log.Warn("Cannot decode")
            errorsFound++
            continue
        }
        hash := key[1:]
        po := s.po(hash)
        datakey := getDataKey(index.Idx, po)
        data, err := s.db.Get(datakey)
        if err != nil {
            found := false

            // The highest possible proximity is 255, so exit loop upon overflow.
            for po = uint8(1); po != 0; po++ {
                datakey = getDataKey(index.Idx, po)
                data, err = s.db.Get(datakey)
                if err == nil {
                    found = true
                    break
                }
            }

            if !found {
                log.Warn(fmt.Sprintf("Chunk %x found but count not be accessed with any po", key))
                errorsFound++
                continue
            }
        }

        ck := data[:32]
        c, err := decodeData(ck, data)
        if err != nil {
            log.Error("decodeData error", "err", err)
            continue
        }

        sdata := c.Data()

        cs := int64(binary.LittleEndian.Uint64(sdata[:8]))
        log.Trace("chunk", "key", fmt.Sprintf("%x", key), "ck", fmt.Sprintf("%x", ck), "dkey", fmt.Sprintf("%x", datakey), "dataidx", index.Idx, "po", po, "len data", len(data), "len sdata", len(sdata), "size", cs)

        // if chunk is to be removed
        if f(c) {
            log.Warn("chunk for cleanup", "key", fmt.Sprintf("%x", key), "ck", fmt.Sprintf("%x", ck), "dkey", fmt.Sprintf("%x", datakey), "dataidx", index.Idx, "po", po, "len data", len(data), "len sdata", len(sdata), "size", cs)
            s.deleteNow(&index, getIndexKey(key[1:]), po)
            removed++
            errorsFound++
        }
    }

    log.Warn(fmt.Sprintf("Found %v errors out of %v entries. Removed %v chunks.", errorsFound, total, removed))
}

// CleanGCIndex rebuilds the garbage collector index from scratch, while
// removing inconsistent elements, e.g., indices with missing data chunks.
// WARN: it's a pretty heavy, long running function.
func (s *LDBStore) CleanGCIndex() error {
    s.lock.Lock()
    defer s.lock.Unlock()

    batch := leveldb.Batch{}

    var okEntryCount uint64
    var totalEntryCount uint64

    // throw out all gc indices, we will rebuild from cleaned index
    it := s.db.NewIterator()
    it.Seek([]byte{keyGCIdx})
    var gcDeletes int
    for it.Valid() {
        rowType, _ := parseIdxKey(it.Key())
        if rowType != keyGCIdx {
            break
        }
        batch.Delete(it.Key())
        gcDeletes++
        it.Next()
    }
    log.Debug("gc", "deletes", gcDeletes)
    if err := s.db.Write(&batch); err != nil {
        return err
    }
    batch.Reset()

    it.Release()

    // corrected po index pointer values
    var poPtrs [256]uint64

    // set to true if chunk count not on 4096 iteration boundary
    var doneIterating bool

    // last key index in previous iteration
    lastIdxKey := []byte{keyIndex}

    // counter for debug output
    var cleanBatchCount int

    // go through all key index entries
    for !doneIterating {
        cleanBatchCount++
        var idxs []dpaDBIndex
        var chunkHashes [][]byte
        var pos []uint8
        it := s.db.NewIterator()

        it.Seek(lastIdxKey)

        // 4096 is just a nice number, don't look for any hidden meaning here...
        var i int
        for i = 0; i < 4096; i++ {

            // this really shouldn't happen unless database is empty
            // but let's keep it to be safe
            if !it.Valid() {
                doneIterating = true
                break
            }

            // if it's not keyindex anymore we're done iterating
            rowType, chunkHash := parseIdxKey(it.Key())
            if rowType != keyIndex {
                doneIterating = true
                break
            }

            // decode the retrieved index
            var idx dpaDBIndex
            err := decodeIndex(it.Value(), &idx)
            if err != nil {
                return fmt.Errorf("corrupt index: %v", err)
            }
            po := s.po(chunkHash)
            lastIdxKey = it.Key()

            // if we don't find the data key, remove the entry
            // if we find it, add to the array of new gc indices to create
            dataKey := getDataKey(idx.Idx, po)
            _, err = s.db.Get(dataKey)
            if err != nil {
                log.Warn("deleting inconsistent index (missing data)", "key", chunkHash)
                batch.Delete(it.Key())
            } else {
                idxs = append(idxs, idx)
                chunkHashes = append(chunkHashes, chunkHash)
                pos = append(pos, po)
                okEntryCount++
                if idx.Idx > poPtrs[po] {
                    poPtrs[po] = idx.Idx
                }
            }
            totalEntryCount++
            it.Next()
        }
        it.Release()

        // flush the key index corrections
        err := s.db.Write(&batch)
        if err != nil {
            return err
        }
        batch.Reset()

        // add correct gc indices
        for i, okIdx := range idxs {
            gcIdxKey := getGCIdxKey(&okIdx)
            gcIdxData := getGCIdxValue(&okIdx, pos[i], chunkHashes[i])
            batch.Put(gcIdxKey, gcIdxData)
            log.Trace("clean ok", "key", chunkHashes[i], "gcKey", gcIdxKey, "gcData", gcIdxData)
        }

        // flush them
        err = s.db.Write(&batch)
        if err != nil {
            return err
        }
        batch.Reset()

        log.Debug("clean gc index pass", "batch", cleanBatchCount, "checked", i, "kept", len(idxs))
    }

    log.Debug("gc cleanup entries", "ok", okEntryCount, "total", totalEntryCount, "batchlen", batch.Len())

    // lastly add updated entry count
    var entryCount [8]byte
    binary.BigEndian.PutUint64(entryCount[:], okEntryCount)
    batch.Put(keyEntryCnt, entryCount[:])

    // and add the new po index pointers
    var poKey [2]byte
    poKey[0] = keyDistanceCnt
    for i, poPtr := range poPtrs {
        poKey[1] = uint8(i)
        if poPtr == 0 {
            batch.Delete(poKey[:])
        } else {
            var idxCount [8]byte
            binary.BigEndian.PutUint64(idxCount[:], poPtr)
            batch.Put(poKey[:], idxCount[:])
        }
    }

    // if you made it this far your harddisk has survived. Congratulations
    return s.db.Write(&batch)
}

// Delete is removes a chunk and updates indices.
// Is thread safe
func (s *LDBStore) Delete(addr Address) error {
    s.lock.Lock()
    defer s.lock.Unlock()

    ikey := getIndexKey(addr)

    idata, err := s.db.Get(ikey)
    if err != nil {
        return err
    }

    var idx dpaDBIndex
    decodeIndex(idata, &idx)
    proximity := s.po(addr)
    return s.deleteNow(&idx, ikey, proximity)
}

// executes one delete operation immediately
// see *LDBStore.delete
func (s *LDBStore) deleteNow(idx *dpaDBIndex, idxKey []byte, po uint8) error {
    batch := new(leveldb.Batch)
    s.delete(batch, idx, idxKey, po)
    return s.db.Write(batch)
}

// adds a delete chunk operation to the provided batch
// if called directly, decrements entrycount regardless if the chunk exists upon deletion. Risk of wrap to max uint64
func (s *LDBStore) delete(batch *leveldb.Batch, idx *dpaDBIndex, idxKey []byte, po uint8) {
    metrics.GetOrRegisterCounter("ldbstore.delete", nil).Inc(1)

    gcIdxKey := getGCIdxKey(idx)
    batch.Delete(gcIdxKey)
    dataKey := getDataKey(idx.Idx, po)
    batch.Delete(dataKey)
    batch.Delete(idxKey)
    s.entryCnt--
    dbEntryCount.Dec(1)
    cntKey := make([]byte, 2)
    cntKey[0] = keyDistanceCnt
    cntKey[1] = po
    batch.Put(keyEntryCnt, U64ToBytes(s.entryCnt))
    batch.Put(cntKey, U64ToBytes(s.bucketCnt[po]))
}

func (s *LDBStore) BinIndex(po uint8) uint64 {
    s.lock.RLock()
    defer s.lock.RUnlock()
    return s.bucketCnt[po]
}

// Put adds a chunk to the database, adding indices and incrementing global counters.
// If it already exists, it merely increments the access count of the existing entry.
// Is thread safe
func (s *LDBStore) Put(ctx context.Context, chunk Chunk) error {
    metrics.GetOrRegisterCounter("ldbstore.put", nil).Inc(1)
    log.Trace("ldbstore.put", "key", chunk.Address())

    ikey := getIndexKey(chunk.Address())
    var index dpaDBIndex

    po := s.po(chunk.Address())

    s.lock.Lock()

    if s.closed {
        s.lock.Unlock()
        return ErrDBClosed
    }
    batch := s.batch

    log.Trace("ldbstore.put: s.db.Get", "key", chunk.Address(), "ikey", fmt.Sprintf("%x", ikey))
    _, err := s.db.Get(ikey)
    if err != nil {
        s.doPut(chunk, &index, po)
    }
    idata := encodeIndex(&index)
    s.batch.Put(ikey, idata)

    // add the access-chunkindex index for garbage collection
    gcIdxKey := getGCIdxKey(&index)
    gcIdxData := getGCIdxValue(&index, po, chunk.Address())
    s.batch.Put(gcIdxKey, gcIdxData)
    s.lock.Unlock()

    select {
    case s.batchesC <- struct{}{}:
    default:
    }

    select {
    case <-batch.c:
        return batch.err
    case <-ctx.Done():
        return ctx.Err()
    }
}

// force putting into db, does not check or update necessary indices
func (s *LDBStore) doPut(chunk Chunk, index *dpaDBIndex, po uint8) {
    data := s.encodeDataFunc(chunk)
    dkey := getDataKey(s.dataIdx, po)
    s.batch.Put(dkey, data)
    index.Idx = s.dataIdx
    s.bucketCnt[po] = s.dataIdx
    s.entryCnt++
    dbEntryCount.Inc(1)
    s.dataIdx++
    index.Access = s.accessCnt
    s.accessCnt++
    cntKey := make([]byte, 2)
    cntKey[0] = keyDistanceCnt
    cntKey[1] = po
    s.batch.Put(cntKey, U64ToBytes(s.bucketCnt[po]))
}

func (s *LDBStore) writeBatches() {
    for {
        select {
        case <-s.quit:
            log.Debug("DbStore: quit batch write loop")
            return
        case <-s.batchesC:
            err := s.writeCurrentBatch()
            if err != nil {
                log.Debug("DbStore: quit batch write loop", "err", err.Error())
                return
            }
        }
    }

}

func (s *LDBStore) writeCurrentBatch() error {
    s.lock.Lock()
    defer s.lock.Unlock()
    b := s.batch
    l := b.Len()
    if l == 0 {
        return nil
    }
    s.batch = newBatch()
    b.err = s.writeBatch(b, wEntryCnt|wAccessCnt|wIndexCnt)
    close(b.c)
    if s.entryCnt >= s.capacity {
        go s.collectGarbage()
    }
    return nil
}

// must be called non concurrently
func (s *LDBStore) writeBatch(b *dbBatch, wFlag uint8) error {
    if wFlag&wEntryCnt > 0 {
        b.Put(keyEntryCnt, U64ToBytes(s.entryCnt))
    }
    if wFlag&wIndexCnt > 0 {
        b.Put(keyDataIdx, U64ToBytes(s.dataIdx))
    }
    if wFlag&wAccessCnt > 0 {
        b.Put(keyAccessCnt, U64ToBytes(s.accessCnt))
    }
    l := b.Len()
    if err := s.db.Write(b.Batch); err != nil {
        return fmt.Errorf("unable to write batch: %v", err)
    }
    log.Trace(fmt.Sprintf("batch write (%d entries)", l))
    return nil
}

// newMockEncodeDataFunc returns a function that stores the chunk data
// to a mock store to bypass the default functionality encodeData.
// The constructed function always returns the nil data, as DbStore does
// not need to store the data, but still need to create the index.
func newMockEncodeDataFunc(mockStore *mock.NodeStore) func(chunk Chunk) []byte {
    return func(chunk Chunk) []byte {
        if err := mockStore.Put(chunk.Address(), encodeData(chunk)); err != nil {
            log.Error(fmt.Sprintf("%T: Chunk %v put: %v", mockStore, chunk.Address().Log(), err))
        }
        return chunk.Address()[:]
    }
}

// tryAccessIdx tries to find index entry. If found then increments the access
// count for garbage collection and returns the index entry and true for found,
// otherwise returns nil and false.
func (s *LDBStore) tryAccessIdx(addr Address, po uint8) (*dpaDBIndex, bool) {
    ikey := getIndexKey(addr)
    idata, err := s.db.Get(ikey)
    if err != nil {
        return nil, false
    }

    index := new(dpaDBIndex)
    decodeIndex(idata, index)
    oldGCIdxKey := getGCIdxKey(index)
    s.batch.Put(keyAccessCnt, U64ToBytes(s.accessCnt))
    index.Access = s.accessCnt
    idata = encodeIndex(index)
    s.accessCnt++
    s.batch.Put(ikey, idata)
    newGCIdxKey := getGCIdxKey(index)
    newGCIdxData := getGCIdxValue(index, po, ikey[1:])
    s.batch.Delete(oldGCIdxKey)
    s.batch.Put(newGCIdxKey, newGCIdxData)
    select {
    case s.batchesC <- struct{}{}:
    default:
    }
    return index, true
}

// GetSchema is returning the current named schema of the datastore as read from LevelDB
func (s *LDBStore) GetSchema() (string, error) {
    s.lock.Lock()
    defer s.lock.Unlock()

    data, err := s.db.Get(keySchema)
    if err != nil {
        if err == leveldb.ErrNotFound {
            return DbSchemaNone, nil
        }
        return "", err
    }

    return string(data), nil
}

// PutSchema is saving a named schema to the LevelDB datastore
func (s *LDBStore) PutSchema(schema string) error {
    s.lock.Lock()
    defer s.lock.Unlock()

    return s.db.Put(keySchema, []byte(schema))
}

// Get retrieves the chunk matching the provided key from the database.
// If the chunk entry does not exist, it returns an error
// Updates access count and is thread safe
func (s *LDBStore) Get(_ context.Context, addr Address) (chunk Chunk, err error) {
    metrics.GetOrRegisterCounter("ldbstore.get", nil).Inc(1)
    log.Trace("ldbstore.get", "key", addr)

    s.lock.Lock()
    defer s.lock.Unlock()
    return s.get(addr)
}

// Has queries the underlying DB if a chunk with the given address is stored
// Returns true if the chunk is found, false if not
func (s *LDBStore) Has(_ context.Context, addr Address) bool {
    s.lock.RLock()
    defer s.lock.RUnlock()

    ikey := getIndexKey(addr)
    _, err := s.db.Get(ikey)

    return err == nil
}

// TODO: To conform with other private methods of this object indices should not be updated
func (s *LDBStore) get(addr Address) (chunk Chunk, err error) {
    if s.closed {
        return nil, ErrDBClosed
    }
    proximity := s.po(addr)
    index, found := s.tryAccessIdx(addr, proximity)
    if found {
        var data []byte
        if s.getDataFunc != nil {
            // if getDataFunc is defined, use it to retrieve the chunk data
            log.Trace("ldbstore.get retrieve with getDataFunc", "key", addr)
            data, err = s.getDataFunc(addr)
            if err != nil {
                return
            }
        } else {
            // default DbStore functionality to retrieve chunk data
            datakey := getDataKey(index.Idx, proximity)
            data, err = s.db.Get(datakey)
            log.Trace("ldbstore.get retrieve", "key", addr, "indexkey", index.Idx, "datakey", fmt.Sprintf("%x", datakey), "proximity", proximity)
            if err != nil {
                log.Trace("ldbstore.get chunk found but could not be accessed", "key", addr, "err", err)
                s.deleteNow(index, getIndexKey(addr), s.po(addr))
                if err == leveldb.ErrNotFound {
                    return nil, ErrChunkNotFound
                }
                return nil, err
            }
        }

        return decodeData(addr, data)
    } else {
        err = ErrChunkNotFound
    }

    return
}

// newMockGetFunc returns a function that reads chunk data from
// the mock database, which is used as the value for DbStore.getFunc
// to bypass the default functionality of DbStore with a mock store.
func newMockGetDataFunc(mockStore *mock.NodeStore) func(addr Address) (data []byte, err error) {
    return func(addr Address) (data []byte, err error) {
        data, err = mockStore.Get(addr)
        if err == mock.ErrNotFound {
            // preserve ErrChunkNotFound error
            err = ErrChunkNotFound
        }
        return data, err
    }
}

func (s *LDBStore) setCapacity(c uint64) {
    s.lock.Lock()
    defer s.lock.Unlock()

    s.capacity = c

    for s.entryCnt > c {
        s.collectGarbage()
    }
}

func (s *LDBStore) Close() {
    close(s.quit)
    s.lock.Lock()
    s.closed = true
    s.lock.Unlock()
    // force writing out current batch
    s.writeCurrentBatch()
    s.db.Close()
}

// SyncIterator(start, stop, po, f) calls f on each hash of a bin po from start to stop
func (s *LDBStore) SyncIterator(since uint64, until uint64, po uint8, f func(Address, uint64) bool) error {
    metrics.GetOrRegisterCounter("ldbstore.synciterator", nil).Inc(1)

    sincekey := getDataKey(since, po)
    untilkey := getDataKey(until, po)
    it := s.db.NewIterator()
    defer it.Release()

    for ok := it.Seek(sincekey); ok; ok = it.Next() {
        metrics.GetOrRegisterCounter("ldbstore.synciterator.seek", nil).Inc(1)

        dbkey := it.Key()
        if dbkey[0] != keyData || dbkey[1] != po || bytes.Compare(untilkey, dbkey) < 0 {
            break
        }
        key := make([]byte, 32)
        val := it.Value()
        copy(key, val[:32])
        if !f(Address(key), binary.BigEndian.Uint64(dbkey[2:])) {
            break
        }
    }
    return it.Error()
}